added modify names parameter to set.dir

[mothur.git] / nameassignment.hpp

diff --git a/nameassignment.hpp b/nameassignment.hpp
index 77b772bfcd130ea0f30d6e3b572fd55a20604239..87f97771392c4eef78854053aa441f5c43e50e76 100644 (file)
--- a/nameassignment.hpp
+++ b/nameassignment.hpp
@@ -1,21 +1,24 @@
 #ifndef NAMEASSIGNMENT_HPP
 #define NAMEASSIGNMENT_HPP
 
-using namespace std;
-
 #include "mothur.h"
 #include "listvector.hpp"
 
 class NameAssignment : public map<string,int> {
 public:
        NameAssignment(string);
-       void readMap(int, int);
+       NameAssignment();
+       void readMap();
        ListVector getListVector();
        int get(string);
-       void print();
+       string get(int);
+       void print(ostream&);
+       void push_back(string);
 private:
        ifstream fileHandle;
        ListVector list;
+       map<int, string> reverse;
+       MothurOut* m;
 };