Merge remote-tracking branch 'origin/master'

[mothur.git] / mothurout.h

diff --git a/mothurout.h b/mothurout.h
index 363a7a88041ac97bfd207558fc4fa445af7d442b..ee602f404bd102f46f41214a3c3d938a51730a0c 100644 (file)
--- a/mothurout.h
+++ b/mothurout.h
@@ -99,7 +99,9 @@ class MothurOut {
                int openOutputFileAppend(string, ofstream&);
         int openOutputFileBinaryAppend(string, ofstream&);
                int openInputFile(string, ifstream&);
-               int openInputFile(string, ifstream&, string); //no error given 
+               int openInputFile(string, ifstream&, string); //no error given
+    
+        bool checkLocations(string&, string);  //filename, inputDir. checks for file in ./, inputdir, default and mothur's exe location.  Returns false if cant be found. If found completes name with location
                string getline(ifstream&);
                string getline(istringstream&);
                void gobble(istream&);