added make.lefse command. fixed bug in make.contigs with trimming reverse barcodes...

[mothur.git] / mothur.h

diff --git a/mothur.h b/mothur.h
index 98b34c31c58c88b614412be4e9ba6874ec1cbe36..dcdd76b21a883ca7a65b2780e9e395212464f925 100644 (file)
--- a/mothur.h
+++ b/mothur.h
@@ -127,6 +127,21 @@ struct PDistCell{
        PDistCell() :  index(0), dist(0) {};
        PDistCell(ull c, float d) :  index(c), dist(d) {}
 };
+/***********************************************************************/
+struct consTax{
+       string name;
+    string taxonomy;
+    int abundance;
+       consTax() :  name(""), taxonomy("unknown"), abundance(0) {};
+       consTax(string n, string t, int a) :  name(n), taxonomy(t), abundance(a) {}
+};
+/***********************************************************************/
+struct consTax2{
+    string taxonomy;
+    int abundance;
+       consTax2() :  taxonomy("unknown"), abundance(0) {};
+       consTax2(string t, int a) :  taxonomy(t), abundance(a) {}
+};
 /************************************************************/
 struct clusterNode {
        int numSeq;