added warning about merging with something above cutoff to cluster. working on chimeras

[mothur.git] / mgclustercommand.cpp

diff --git a/mgclustercommand.cpp b/mgclustercommand.cpp
index 07c51479f35ff00db1694dcef2bc135df32976da..fba2959b5f11751ea714ed79d8c2fcdf0ac24bc4 100644 (file)
--- a/mgclustercommand.cpp
+++ b/mgclustercommand.cpp
@@ -191,7 +191,7 @@ int MGClusterCommand::execute(){
                        //cluster using cluster classes
                        while (distMatrix->getSmallDist() < cutoff && distMatrix->getNNodes() > 0){
                                
-                               cluster->update();
+                               cluster->update(cutoff);
                                float dist = distMatrix->getSmallDist();
                                float rndDist = roundDist(dist, precision);