fixes while testing

[mothur.git] / mgclustercommand.cpp

diff --git a/mgclustercommand.cpp b/mgclustercommand.cpp
index e5dd1a30141af8a7573f7117f5883399a3a409e4..3ed9bf2131a45ac7a4b0ac44d959b16bfe28cd36 100644 (file)
--- a/mgclustercommand.cpp
+++ b/mgclustercommand.cpp
@@ -25,6 +25,7 @@ vector<string> MGClusterCommand::getValidParameters(){
 //**********************************************************************************************************************
 MGClusterCommand::MGClusterCommand(){  
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["list"] = tempOutNames;