added cooccurence command

[mothur.git] / metastatscommand.cpp

diff --git a/metastatscommand.cpp b/metastatscommand.cpp
index e23224bf20e9977e842bc78e765cd95e018a1666..59916492213cf56c8851969876b1df7907f26f23 100644 (file)
--- a/metastatscommand.cpp
+++ b/metastatscommand.cpp
@@ -232,21 +232,19 @@ int MetaStatsCommand::execute(){
                //only 1 combo
                if (numGroups == 2) { processors = 1; }
                else if (numGroups < 2) { m->mothurOut("Not enough sets, I need at least 2 valid sets. Unable to complete command."); m->mothurOutEndLine(); m->control_pressed = true; }
-               
-//             #if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
-                       if(processors != 1){
-                               int numPairs = namesOfGroupCombos.size();
-                               int numPairsPerProcessor = numPairs / processors;
+
+        if(processors != 1){
+            int numPairs = namesOfGroupCombos.size();
+            int numPairsPerProcessor = numPairs / processors;
                        
-                               for (int i = 0; i < processors; i++) {
-                                       int startPos = i * numPairsPerProcessor;
-                                       if(i == processors - 1){
-                                               numPairsPerProcessor = numPairs - i * numPairsPerProcessor;
-                                       }
-                                       lines.push_back(linePair(startPos, numPairsPerProcessor));
-                               }
-                       }
-//             #endif
+            for (int i = 0; i < processors; i++) {
+                int startPos = i * numPairsPerProcessor;
+                if(i == processors - 1){
+                    numPairsPerProcessor = numPairs - i * numPairsPerProcessor;
+                }
+                lines.push_back(linePair(startPos, numPairsPerProcessor));
+            }
+        }
                
                //as long as you are not at the end of the file or done wih the lines you want
                while((lookup[0] != NULL) && ((allLines == 1) || (userLabels.size() != 0))) {