removed various build warnings

[mothur.git] / metastats2.c

diff --git a/metastats2.c b/metastats2.c
index de2a9303e49491384b122cdef6529dacbcc4df5c..6601b09a365774b59ca8752f504fbfb5ab0cd4d3 100644 (file)
--- a/metastats2.c
+++ b/metastats2.c
@@ -5,13 +5,13 @@
 
 int metastat_main (char* outputFileName, int numRows, int numCols, double threshold, int numPermutations, double** data, int secondGroupingStart){
        
-       int size,c=0,i=0,j=0,k,counter=0, bflag=0; 
+       int size,c=0,i=0,j=0,counter=0, bflag=0; 
        int B=numPermutations;
        int row = numRows;
        int col = numCols;
        int g = secondGroupingStart;
        double thresh=threshold;
-       double placeholder=0,min=0; 
+       double min=0; 
        
        char output[1024];
        strcpy(output, outputFileName);
@@ -24,7 +24,7 @@ int metastat_main (char* outputFileName, int numRows, int numCols, double thresh
        // Initialize the matrices
        size = row*col;
        double matrix[row][col];
-       double pmatrix[size],pmatrix2[size],permuted[size];  
+       double pmatrix[size],permuted[size];  
        double storage[row][9];
        
        for (i=0;i<row;i++){
@@ -343,7 +343,7 @@ void testp(double *permuted_ttests,int *B,double *permuted,
                   *ps) {
        
        double Tvalues[*nr];
-       int a, b, n, i, j,k=0;
+       int a, b, n, j;
        
        a = *B;
        b = *nr;