removed line option

[mothur.git] / matrixoutputcommand.h

diff --git a/matrixoutputcommand.h b/matrixoutputcommand.h
index 07743e5b4df6d867323c89c2acd78b241486bd00..02e8fe6b4cb75351fadfc5a503b78ed6bd589a7d 100644 (file)
--- a/matrixoutputcommand.h
+++ b/matrixoutputcommand.h
@@ -18,7 +18,7 @@
 // aka. dist.shared()
 
 /* This command create a tree file for each similarity calculator at distance level, using various calculators to find the similiarity between groups. 
-       The user can select the lines or labels they wish to use as well as the groups they would like included.
+       The user can select the labels they wish to use as well as the groups they would like included.
        They can also use as many or as few calculators as they wish. */
        
 class GlobalData;
@@ -47,9 +47,8 @@ private:
        ofstream out;
 
        bool abort, allLines;
-       set<int> lines; //hold lines to be used
        set<string> labels; //holds labels to be used
-       string outputFile, calc, groups, line, label;
+       string outputFile, calc, groups, label;
        vector<string>  Estimators, Groups; //holds estimators to be used