fixed bug in pre.cluster with output file name change and other bugs while testing...

[mothur.git] / matrixoutputcommand.cpp

diff --git a/matrixoutputcommand.cpp b/matrixoutputcommand.cpp
index b7e1dae2f5c37e4deffc613ba5024f977906b7da..d2c29bdee9b6fc84481f89775f497b3165b72b4b 100644 (file)
--- a/matrixoutputcommand.cpp
+++ b/matrixoutputcommand.cpp
@@ -796,7 +796,7 @@ int MatrixOutputCommand::process(vector<SharedRAbundVector*> thisLookup){
                 outAve.close();
                 
                 variables["[tag2]"] = "std";
-                distFileName = outputDir + getOutputFileName("phylip",variables);
+                distFileName = getOutputFileName("phylip",variables);
                 outputNames.push_back(distFileName); outputTypes["phylip"].push_back(distFileName);
                 ofstream outSTD;
                 m->openOutputFile(distFileName, outSTD);