fixes while testing

[mothur.git] / matrixoutputcommand.cpp

diff --git a/matrixoutputcommand.cpp b/matrixoutputcommand.cpp
index 020ccff57c813168625132e83c9c198eb113a121..2ea9377f8e559cc21e107724de4c30b0b1ba9c47 100644 (file)
--- a/matrixoutputcommand.cpp
+++ b/matrixoutputcommand.cpp
@@ -34,6 +34,7 @@ vector<string> MatrixOutputCommand::getValidParameters(){
 //**********************************************************************************************************************
 MatrixOutputCommand::MatrixOutputCommand(){    
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["phylip"] = tempOutNames;