+++ /dev/null
-#ifndef MAKEGROUPCOMMAND_H
-#define MAKEGROUPCOMMAND_H
-
-/*
- * makegroupcommand.h
- * Mothur
- *
- * Created by westcott on 5/7/10.
- * Copyright 2010 Schloss Lab. All rights reserved.
- *
- */
-
-#include "command.hpp"
-
-class MakeGroupCommand : public Command {
-
-public:
- MakeGroupCommand(string);
- MakeGroupCommand();
- ~MakeGroupCommand(){}
-
- vector<string> setParameters();
- string getCommandName() { return "make.group"; }
- string getCommandCategory() { return "General"; }
- string getHelpString();
- string getCitation() { return "http://www.mothur.org/wiki/Make.group"; }
- string getDescription() { return "creates a group file"; }
-
- int execute();
- void help() { m->mothurOut(getHelpString()); }
-
-private:
-
- string fastaFileName, groups, outputDir, filename, output;
- vector<string> fastaFileNames;
- vector<string> groupsNames, outputNames;
-
- bool abort;
-};
-
-#endif
-