some bug fixes

[mothur.git] / makefile

diff --git a/makefile b/makefile
index 3f0893c5ad82d811fb4c5cf05f86f0326b4561c8..dccd2c3d3dd12235530bba90da5ffeaa53b670cc 100644 (file)
--- a/makefile
+++ b/makefile
@@ -13,7 +13,7 @@
 
 CXXFLAGS += -O3
 
-MOTHUR_FILES = "\"Enter_your_default_path_here\""
+MOTHUR_FILES = "\"../Release\""
 ifeq  ($(strip $(MOTHUR_FILES)),"\"Enter_your_default_path_here\"")
 else
        CXXFLAGS += -DMOTHUR_FILES=${MOTHUR_FILES}
@@ -39,7 +39,7 @@ endif
 # if you do not want to use the readline library, set this to no.
 # make sure you have the library installed
 
-USEREADLINE ?= yes
+USEREADLINE ?= no
 
 ifeq  ($(strip $(USEREADLINE)),yes)
     CXXFLAGS += -DUSE_READLINE
@@ -48,7 +48,7 @@ ifeq  ($(strip $(USEREADLINE)),yes)
       -lncurses
 endif
 
-USEMPI ?= no
+USEMPI ?= yes
 
 ifeq  ($(strip $(USEMPI)),yes)
     CXX = mpic++