reworked the classifiers summary file added groupfile option to classify.seqs, added...

[mothur.git] / makefile

diff --git a/makefile b/makefile
index 5812d4551f9c6cc635f8ed4ee5bde2505a4b18df..d4aac7f8f4fc2252cb51ab17ca553f36b265de00 100644 (file)
--- a/makefile
+++ b/makefile
@@ -220,7 +220,7 @@ mothur : \
                ./classify.o\\r
                ./phylotree.o\\r
                ./bayesian.o\
-               ./rawtrainingdatamaker.o\\r
+               ./phylosummary.o\\r
                ./alignmentdb.o\\r
                ./knn.o\\r
                ./distancedb.o\\r
@@ -418,7 +418,7 @@ mothur : \
                ./classify.o\\r
                ./phylotree.o\\r
                ./bayesian.o\
-               ./rawtrainingdatamaker.o\\r
+               ./phylosummary.o\\r
                ./alignmentdb.o\\r
                ./knn.o\\r
                ./distancedb.o\\r
@@ -619,7 +619,7 @@ clean :
                ./classify.o\\r
                ./phylotree.o\\r
                ./bayesian.o\
-               ./rawtrainingdatamaker.o\\r
+               ./phylosummary.o\\r
                ./alignmentdb.o\\r
                ./knn.o\\r
                ./distancedb.o\\r
@@ -1623,9 +1623,9 @@ install : mothur
 ./chimerabellerophoncommand.o : chimerabellerophoncommand.cpp\r
        $(CC) $(CC_OPTIONS) chimerabellerophoncommand.cpp -c $(INCLUDE) -o ./chimerabellerophoncommand.o\r
 
-# Item # 171 -- rawtrainingdatamaker --\r
-./rawtrainingdatamaker.o : rawtrainingdatamaker.cpp\r
-       $(CC) $(CC_OPTIONS) rawtrainingdatamaker.cpp -c $(INCLUDE) -o ./rawtrainingdatamaker.o\r
+# Item # 171 -- phylosummary --\r
+./phylosummary.o : phylosummary.cpp\r
+       $(CC) $(CC_OPTIONS) phylosummary.cpp -c $(INCLUDE) -o ./phylosummary.o\r
 \r
 \r
 \r