added clearcut command

[mothur.git] / makefile

diff --git a/makefile b/makefile
index ecdbcf039c52114204e40d2e11efae12518fe923..7c214754fd27c4fa6a78757fe74be6dc69323a98 100644 (file)
--- a/makefile
+++ b/makefile
@@ -147,7 +147,8 @@ mothur : \
                ./groupmap.o\\r
                ./helpcommand.o\
                ./makegroupcommand.o\
-               ./chopseqscommand.o\\r
+               ./chopseqscommand.o\
+               ./clearcutcommand.o\\r
                ./inputdata.o\\r
                ./jackknife.o\\r
                ./kmer.o\\r
@@ -350,7 +351,8 @@ mothur : \
                ./groupmap.o\\r
                ./helpcommand.o\
                ./makegroupcommand.o\
-               ./chopseqscommand.o\\r
+               ./chopseqscommand.o\
+               ./clearcutcommand.o\\r
                ./inputdata.o\\r
                ./jackknife.o\\r
                ./kmer.o\\r
@@ -556,7 +558,8 @@ clean :
                ./groupmap.o\\r
                ./helpcommand.o\
                ./makegroupcommand.o\
-               ./chopseqscommand.o\\r
+               ./chopseqscommand.o\
+               ./clearcutcommand.o\\r
                ./inputdata.o\\r
                ./jackknife.o\\r
                ./kmer.o\\r
@@ -1661,6 +1664,10 @@ install : mothur
 
 # Item # 202 -- chopseqscommand --\r
 ./chopseqscommand.o : chopseqscommand.cpp\r
-       $(CC) $(CC_OPTIONS) chopseqscommand.cpp -c $(INCLUDE) -o ./chopseqscommand.o\r
+       $(CC) $(CC_OPTIONS) chopseqscommand.cpp -c $(INCLUDE) -o ./chopseqscommand.o
+
+# Item # 203 -- clearcutcommand --\r
+./clearcutcommand.o : clearcutcommand.cpp\r
+       $(CC) $(CC_OPTIONS) clearcutcommand.cpp -c $(INCLUDE) -o ./clearcutcommand.o\r
 \r
 ##### END RUN ####\r