working on pam

[mothur.git] / makefile

diff --git a/makefile b/makefile
index 90e495778f99519ceac575c916996f25b2faa3fa..42e71a0e42bb0341c3cff63a8c616d6572537f4b 100644 (file)
--- a/makefile
+++ b/makefile
@@ -15,9 +15,10 @@ USEREADLINE ?= yes
 CYGWIN_BUILD ?= no
 USECOMPRESSION ?= no
 MOTHUR_FILES="\"Enter_your_default_path_here\""
-RELEASE_DATE = "\"12/7/2011\""
-VERSION = "\"1.22.0\""
+RELEASE_DATE = "\"10/16/2013\""
+VERSION = "\"1.32.1\""
 FORTAN_COMPILER = gfortran
+FORTRAN_FLAGS = 
 
 # Optimize to level 3:
 CXXFLAGS += -O3 
@@ -32,12 +33,13 @@ ifeq  ($(strip $(64BIT_VERSION)),yes)
        #if you using cygwin to build Windows the following line
        #CXX = x86_64-w64-mingw32-g++
        #CC = x86_64-w64-mingw32-g++
+       #FORTAN_COMPILER = x86_64-w64-mingw32-gfortran
        #TARGET_ARCH += -m64 -static
 
        #if you are a linux user use the following line
-       #CXXFLAGS += -mtune=native -march=native -m64
+       #CXXFLAGS += -mtune=native -march=native 
        
-        CXXFLAGS += -DBIT_VERSION
+       CXXFLAGS += -DBIT_VERSION 
 endif
 
 
@@ -96,12 +98,12 @@ mothur : fortranSource $(OBJECTS) uchime
        $(CXX) $(LDFLAGS) $(TARGET_ARCH) -o $@ $(OBJECTS) $(LIBS)
        
        strip mothur
-
+ 
 uchime:
        cd uchime_src && ./mk && mv uchime .. && cd ..
        
 fortranSource:
-       ${FORTAN_COMPILER} -c *.f
+       ${FORTAN_COMPILER} -c $(FORTRAN_FLAGS) *.f
 
 install : mothur
 #      cp mothur ../Release/mothur