added parse.fastaq command, added permute option to venn command, fixed bug with...

[mothur.git] / makefile

diff --git a/makefile b/makefile
index 773b52f3db800aafb94a1da4dbabbe1967134759..0fd76c198f15e808686093df22a49eaa1c2b4246 100644 (file)
--- a/makefile
+++ b/makefile
@@ -13,6 +13,21 @@
 
 CXXFLAGS += -O3
 
+64BIT_VERSION ?= yes
+
+ifeq  ($(strip $(64BIT_VERSION)),yes)
+       #if you are using centos uncomment the following lines
+       #CXX = g++44
+       
+       #if you are a mac user use the following line
+       TARGET_ARCH += -arch x86_64
+       
+       #if you are a linux user use the following line
+       #CXXFLAGS += -mtune=native -march=native -m64
+       
+        CXXFLAGS += -DBIT_VERSION
+endif
+
 MOTHUR_FILES = "\"../Release\""
 
 RELEASE_DATE = "\"9/17/2010\""
@@ -31,21 +46,6 @@ ifeq  ($(strip $(CYGWIN_BUILD)),yes)
     LDFLAGS += -mno-cygwin 
 endif
 
-64BIT_VERSION ?= yes
-
-ifeq  ($(strip $(64BIT_VERSION)),yes)
-        CXXFLAGS += -DBIT_VERSION
-       
-       #if you are using centos uncomment the following lines
-       #CXX = g++44
-       
-       #if you are a mac user use the following line
-       TARGET_ARCH += -arch x86_64
-       
-       #if you are a linux user use the following line
-       #CXXFLAGS += -mtune=native -march=native -m64
-endif
-
 # if you do not want to use the readline library, set this to no.
 # make sure you have the library installed