moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / makefastqcommand.h

diff --git a/makefastqcommand.h b/makefastqcommand.h
deleted file mode 100644 (file)
index 1c209aa..0000000
--- a/makefastqcommand.h
+++ /dev/null
@@ -1,48 +0,0 @@
-#ifndef MAKEFASTQCOMMAND_H
-#define MAKEFASTQCOMMAND_H
-
-/*
- *  makefastqcommand.h
- *  mothur
- *
- *  Created by westcott on 2/14/11.
- *  Copyright 2011 Schloss Lab. All rights reserved.
- *
- */
-
-
-#include "command.hpp"
-
-class MakeFastQCommand : public Command {
-       
-public:
-       
-       MakeFastQCommand(string);       
-       MakeFastQCommand();
-       ~MakeFastQCommand(){}
-       
-       vector<string> setParameters();
-       string getCommandName()                 { return "make.fastq";                          }
-       string getCommandCategory()             { return "Sequence Processing";         }
-       string getHelpString(); 
-       string getCitation() { return "http://www.mothur.org/wiki/Make.fastq"; }
-       string getDescription()         { return "creates a fastq file from a fasta and quality file"; }
-
-       
-       int execute(); 
-       void help() { m->mothurOut(getHelpString()); }  
-       
-       
-private:
-       
-       string fastafile, qualfile, outputDir;
-       bool abort;
-       vector<string> outputNames;
-       
-       string convertQual(vector<int>);
-       
-};
-
-#endif
-
-