changing command name classify.shared to classifyrf.shared

[mothur.git] / linearalgebra.h

diff --git a/linearalgebra.h b/linearalgebra.h
index e0933ee52564915d35bcf6e9f91f73c2cea80d2d..3c86cb1de9fb697bac4aae04adc298c8994b4e83 100644 (file)
--- a/linearalgebra.h
+++ b/linearalgebra.h
@@ -29,6 +29,8 @@ public:
        double calcPearson(vector<vector<double> >&, vector<vector<double> >&);
        double calcSpearman(vector<vector<double> >&, vector<vector<double> >&);
        double calcKendall(vector<vector<double> >&, vector<vector<double> >&);
+    double calcKruskalWallis(vector<spearmanRank>&, double&);
+    double calcWilcoxon(vector<double>&, vector<double>&, double&);
        
        double calcPearson(vector<double>&, vector<double>&, double&);
        double calcSpearman(vector<double>&, vector<double>&, double&);
@@ -41,7 +43,7 @@ public:
     vector<double> solveEquations(vector<vector<double> >, vector<double>);
     vector<float> solveEquations(vector<vector<float> >, vector<float>);
     vector<vector<double> > getInverse(vector<vector<double> >);
-
+    double choose(double, double);
     
 private:
        MothurOut* m;
@@ -50,11 +52,12 @@ private:
     double betacf(const double, const double, const double);
     double betai(const double, const double, const double);
     double gammln(const double);
-    double gammp(const double, const double);
     double gammq(const double, const double);
     double gser(double&, const double, const double, double&);
     double gcf(double&, const double, const double, double&);
     double erfcc(double);
+    double gammp(const double, const double);
+    double pnorm(double x);
     
     double ran0(int&); //for testing 
     double ran1(int&); //for testing
@@ -68,7 +71,8 @@ private:
     
     void ludcmp(vector<vector<float> >&, vector<int>&, float&);
     void lubksb(vector<vector<float> >&, vector<int>&, vector<float>&);
-
+    
+    
     
 };