finished work on classify.seqs bayesian method and various bug fixes

[mothur.git] / kmerdb.hpp

diff --git a/kmerdb.hpp b/kmerdb.hpp
index b64412d259a85870c57253249a4e355193476c9a..bdd9ca503910e6b764c3c067b5d9305409fafd6f 100644 (file)
--- a/kmerdb.hpp
+++ b/kmerdb.hpp
@@ -32,6 +32,9 @@ public:
        void addSequence(Sequence);
        vector<int> findClosestSequences(Sequence*, int);
        void readKmerDB(ifstream&);
+       int getCount(int);  //returns number of sequences with that kmer number
+       vector<int> getSequencesWithKmer(int);  //returns vector of sequences that contain kmer passed in
+       int getMaxKmer() { return maxKmer; }
        
 private: