ofstream kmerFile; // once we have the kmerLocations folder print it out
openOutputFile(kmerDBName, kmerFile); // to a file
+ //output version
+ kmerFile << m->getVersion() << endl;
+
for(int i=0;i<maxKmer;i++){ // step through all of the possible kmer numbers
kmerFile << i << ' ' << kmerLocations[i].size(); // print the kmer number and the number of sequences with
for(int j=0;j<kmerLocations[i].size();j++){ // that kmer. then print out the indices of the sequences
kmerDBFile.seekg(0); // start at the beginning of the file
+ //read version
+ string line = getline(kmerDBFile); gobble(kmerDBFile);
+
string seqName;
int seqNumber;