moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / kmer.hpp

diff --git a/kmer.hpp b/kmer.hpp
deleted file mode 100644 (file)
index 9a3c5a0..0000000
--- a/kmer.hpp
+++ /dev/null
@@ -1,38 +0,0 @@
-#ifndef KMER_HPP
-#define KMER_HPP
-
-/*
- *  kmer.hpp
- *  
- *
- *  Created by Pat Schloss on 12/15/08.
- *  Copyright 2008 Patrick D. Schloss. All rights reserved.
- *
- */
-
-#include "mothur.h"
-
-/**************************************************************************************************/
-
-class Kmer {
-       
-public:
-       Kmer(int);
-       string getKmerString(string);
-       int getKmerNumber(string, int);
-       string getKmerBases(int);
-       int getReverseKmerNumber(int);
-       vector< map<int, int> > getKmerCounts(string sequence);  //for use in chimeraCheck
-       
-private:
-       char getASCII(int);
-       int getNumber(char);
-       int kmerSize;
-       int maxKmer;
-       int nKmers;
-};
-
-/**************************************************************************************************/
-
-
-#endif