added modify names parameter to set.dir

[mothur.git] / jackknife.cpp

diff --git a/jackknife.cpp b/jackknife.cpp
index 7f613665eb3db230c5c14c9240faa0e482f450be..8f0629832208e797efbdc815e619bab28ed49046 100644 (file)
--- a/jackknife.cpp
+++ b/jackknife.cpp
@@ -12,7 +12,7 @@
 /***********************************************************************/
 void Jackknife::getAMatrix(void){
        try {
-               vector<vector<double> > B = binomial(maxOrder);
+               vector<vector<double> > B = m->binomial(maxOrder);
 
                aMat.resize(maxOrder+1);
 
@@ -67,7 +67,7 @@ EstOutput Jackknife::getValues(SAbundVector* rank){
        
                double jack, jacklci, jackhci;
        
-               double maxRank = (double)rank->getMaxRank();
+               int maxRank = (double)rank->getMaxRank();
                int S = rank->getNumBins();
 
                double N[maxOrder+1];