working on anosim command

[mothur.git] / homovacommand.cpp

diff --git a/homovacommand.cpp b/homovacommand.cpp
index a8e2d13f5003f0a8cba0c637e48573aebf134828..28f560f75ccd2b56613b0a79253dc1f462f20194 100644 (file)
--- a/homovacommand.cpp
+++ b/homovacommand.cpp
@@ -322,7 +322,7 @@ void HomovaCommand::help(){
                m->mothurOut("The homova command can only be executed after a successful read.otu command of a list and group or shared file, or by providing a phylip formatted distance matrix.\n");
                m->mothurOut("The homova command outputs a .homova file. \n");
                m->mothurOut("The homova command parameters are phylip, iters, groups, label, design, sets and processors.  The design parameter is required.\n");
-               m->mothurOut("The design parameter allows you to assign your groups to sets when you are running amova. It is required. \n");
+               m->mothurOut("The design parameter allows you to assign your groups to sets when you are running homova. It is required. \n");
                m->mothurOut("The design file looks like the group file.  It is a 2 column tab delimited file, where the first column is the group name and the second column is the set the group belongs to.\n");
                m->mothurOut("The sets parameter allows you to specify which of the sets in your designfile you would like to analyze. The set names are separated by dashes. THe default is all sets in the designfile. To run the pairwise comparisons of all sets use sets=all.\n");
                m->mothurOut("The iters parameter allows you to set number of randomization for the P value.  The default is 1000. \n");