added modify names parameter to set.dir

[mothur.git] / helpcommand.h

diff --git a/helpcommand.h b/helpcommand.h
index d4e7b1fda16a88f8e88a30a46ba70e50fe1ce290..aedb7b5a626570f39f16d420ca7bd82a0034f740 100644 (file)
--- a/helpcommand.h
+++ b/helpcommand.h
@@ -19,21 +19,23 @@ class HelpCommand : public Command {
 public:
        HelpCommand(string);
        HelpCommand() {}
-       ~HelpCommand();
-       vector<string> getRequiredParameters();
-       vector<string> getValidParameters();
-       vector<string> getRequiredFiles();
-       map<string, vector<string> > getOutputFiles() { return outputTypes; }
-       int execute();
-       void help() {};
+       ~HelpCommand(){}
        
-private:
-       CommandFactory* validCommands;
-       vector<string> outputNames;
-       map<string, vector<string> > outputTypes;
+       vector<string> setParameters()  { return outputNames;   } //dummy, doesn't really do anything   
+       string getCommandName()                 { return "help";                }
+       string getCommandCategory()             { return "Hidden";              }
+       string getHelpString() { return "For more information about a specific command type 'commandName(help)' i.e. 'cluster(help)'"; }        
+     string getOutputPattern(string) { return "";                }
+       string getCitation() { return "no citation"; }
+       string getDescription()         { return "help"; }
+
+       int execute(); 
+       void help() { m->mothurOut(getHelpString()); }  
        
        
 private:
+       CommandFactory* validCommands;
+       vector<string> outputNames;     
                
 };