fixes while testing 1.33.0

[mothur.git] / helpcommand.cpp

diff --git a/helpcommand.cpp b/helpcommand.cpp
index aeb7efc0b77e0ee0a04e5310af8d81c0049e72a7..ef54dae941edcf3d8f2720e931d8a9a293574ee3 100644 (file)
--- a/helpcommand.cpp
+++ b/helpcommand.cpp
@@ -10,60 +10,23 @@
 #include "helpcommand.h"
 
 //**********************************************************************************************************************
-vector<string> HelpCommand::getValidParameters(){      
-       try {
-               
-               vector<string> myArray; 
-               return myArray;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "HelpCommand", "getValidParameters");
-               exit(1);
-       }
-}
-//**********************************************************************************************************************
-vector<string> HelpCommand::getRequiredParameters(){   
-       try {
-               vector<string> myArray;
-               return myArray;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "HelpCommand", "getRequiredParameters");
-               exit(1);
-       }
+
+HelpCommand::HelpCommand(string option)  {     
+       validCommands = CommandFactory::getInstance();  
 }
 //**********************************************************************************************************************
-vector<string> HelpCommand::getRequiredFiles(){        
+int HelpCommand::execute(){
        try {
-               vector<string> myArray;
-               return myArray;
+        validCommands->printCommands(cout);
+               m->mothurOut("For more information about a specific command type 'commandName(help)' i.e. 'read.dist(help)'"); m->mothurOutEndLine();
+       
+               m->mothurOutEndLine(); m->mothurOut("For further assistance please refer to the Mothur manual on our wiki at http://www.mothur.org/wiki, or contact Pat Schloss at mothur.bugs@gmail.com.\n");
+       
+               return 0;
        }
        catch(exception& e) {
-               m->errorOut(e, "HelpCommand", "getRequiredFiles");
+               m->errorOut(e, "HelpCommand", "execute");
                exit(1);
        }
 }
-//**********************************************************************************************************************
-
-HelpCommand::HelpCommand(string option)  {
-       
-       validCommands = CommandFactory::getInstance();
-       
-}
-
-//**********************************************************************************************************************
-
-HelpCommand::~HelpCommand(){}
-
-//**********************************************************************************************************************
-
-int HelpCommand::execute(){
-       validCommands->printCommands(cout);
-       m->mothurOut("For more information about a specific command type 'commandName(help)' i.e. 'read.dist(help)'"); m->mothurOutEndLine();
-       
-       m->mothurOutEndLine(); m->mothurOut("For further assistance please refer to the Mothur manual on our wiki at http://www.mothur.org/wiki, or contact Pat Schloss at mothur.bugs@gmail.com.\n");
-       
-       return 0;
-}
-
 //**********************************************************************************************************************/