+++ /dev/null
-/*
- * helpcommand.cpp
- * Dotur
- *
- * Created by Sarah Westcott on 1/2/09.
- * Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "helpcommand.h"
-
-//**********************************************************************************************************************
-
-HelpCommand::HelpCommand(string option) {
- validCommands = CommandFactory::getInstance();
-}
-//**********************************************************************************************************************
-int HelpCommand::execute(){
- try {
- validCommands->printCommands(cout);
- m->mothurOut("For more information about a specific command type 'commandName(help)' i.e. 'read.dist(help)'"); m->mothurOutEndLine();
-
- m->mothurOutEndLine(); m->mothurOut("For further assistance please refer to the Mothur manual on our wiki at http://www.mothur.org/wiki, or contact Pat Schloss at mothur.bugs@gmail.com.\n");
-
- return 0;
- }
- catch(exception& e) {
- m->errorOut(e, "HelpCommand", "execute");
- exit(1);
- }
-}
-//**********************************************************************************************************************/