moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / heatmap.h

diff --git a/heatmap.h b/heatmap.h
deleted file mode 100644 (file)
index 2b49176..0000000
--- a/heatmap.h
+++ /dev/null
@@ -1,80 +0,0 @@
-#ifndef HEATMAP_H
-#define HEATMAP_H
-/*
- *  heatmap.h
- *  Mothur
- *
- *  Created by Sarah Westcott on 3/25/09.
- *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "rabundvector.hpp"
-#include "sharedrabundvector.h"
-#include "sharedrabundfloatvector.h"
-#include "datavector.hpp"
-
-
-/***********************************************************************/
-struct binCount {
-               int bin;
-               int abund;
-               binCount(int i, int j) : bin(i), abund(j) {}
-};
-/***********************************************************************/
-struct binCountFloat {
-               int bin;
-               float abund;
-               binCountFloat(int i, float j) : bin(i), abund(j) {}
-};
-
-/***********************************************************************/
-//sorts highest abund to lowest
-inline bool comparebinCounts(binCount left, binCount right){
-       return (left.abund > right.abund);      
-}
-/***********************************************************************/
-//sorts highest abund to lowest
-inline bool comparebinFloatCounts(binCountFloat left, binCountFloat right){
-       return (left.abund > right.abund);      
-}
-/***********************************************************************/
-
-class HeatMap {
-       
-       public:
-               HeatMap(string, string, int, int, string, string);
-               ~HeatMap(){};
-       
-               string getPic(RAbundVector*);
-               string getPic(vector<SharedRAbundVector*>);
-               string getPic(vector<SharedRAbundFloatVector*>);
-
-       private:
-               int sortSharedVectors(vector<SharedRAbundVector*>& );
-               int sortSharedVectors(vector<SharedRAbundFloatVector*>& );
-               int sortRabund(RAbundVector*&);
-               void printLegend(int, float);
-
-               string format, sorted, groupComb, scaler, outputDir, inputfile;
-               ofstream outsvg;
-               MothurOut* m;
-               int numOTU, fontSize;
-               
-               map<int, int> orderTopGroup(vector<SharedRAbundVector*>&);
-               map<int, int> orderTopOtu(vector<SharedRAbundVector*>&);
-               map<int, int> orderShared(vector<SharedRAbundVector*>&);
-               map<int, int> orderTopGroup(vector<SharedRAbundFloatVector*>&);
-               map<int, int> orderTopOtu(vector<SharedRAbundFloatVector*>&);
-               map<int, int> orderShared(vector<SharedRAbundFloatVector*>&);
-
-                       
-};
-
-/***********************************************************************/
-
-#endif
-
-
-
-