some changes while testing 1.9

[mothur.git] / hclustercommand.cpp

diff --git a/hclustercommand.cpp b/hclustercommand.cpp
index d9a14d9b5979636dba434733a132d35c25de8568..f98190873eb7219b86f3da445de3fbf9da8ff848 100644 (file)
--- a/hclustercommand.cpp
+++ b/hclustercommand.cpp
@@ -189,7 +189,7 @@ int HClusterCommand::execute(){
                time_t estart = time(NULL);
                
                if (!sorted) {
-                       read = new ReadCluster(distfile, cutoff);       
+                       read = new ReadCluster(distfile, cutoff, outputDir);    
                        read->setFormat(format);
                        read->read(globaldata->nameMap);