added cluster.split command

[mothur.git] / hclustercommand.cpp

diff --git a/hclustercommand.cpp b/hclustercommand.cpp
index 89c6dbd4d27d61ade30c0668a2376281298bd37d..dc14e1670c5221599dd14929dd6d08fde6c6b766 100644 (file)
--- a/hclustercommand.cpp
+++ b/hclustercommand.cpp
@@ -192,7 +192,7 @@ int HClusterCommand::execute(){
                time_t estart = time(NULL);
                
                if (!sorted) {
-                       read = new ReadCluster(distfile, cutoff, outputDir);    
+                       read = new ReadCluster(distfile, cutoff, outputDir, true);      
                        read->setFormat(format);
                        read->read(globaldata->nameMap);