added groups option to get.oturep command

[mothur.git] / groupmap.cpp

diff --git a/groupmap.cpp b/groupmap.cpp
index bc871c8e68e27ae1a90ccea96b3121aaea5611e3..d57646e3e3dad937d3ca0fa81b26f402cfa1ad4d 100644 (file)
--- a/groupmap.cpp
+++ b/groupmap.cpp
@@ -27,7 +27,7 @@ int GroupMap::readMap() {
                int error = 0;
 
                while(fileHandle){
-                       fileHandle >> seqName;                  //read from first column
+                       fileHandle >> seqName;  gobble(fileHandle);             //read from first column
                        fileHandle >> seqGroup;                 //read from second column
                        
                        if (m->control_pressed) {  fileHandle.close();  return 1; }