moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / goodscoverage.cpp

diff --git a/goodscoverage.cpp b/goodscoverage.cpp
deleted file mode 100644 (file)
index 75baa7b..0000000
--- a/goodscoverage.cpp
+++ /dev/null
@@ -1,35 +0,0 @@
-/*
- *  goodscoverage.cpp
- *  Mothur
- *
- *  Created by Thomas Ryabin on 4/8/09.
- *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "goodscoverage.h"
-#include "calculator.h"
-
-/**********************************************************/
-
-EstOutput GoodsCoverage::getValues(SAbundVector* rank){
-       try {
-               data.resize(1,0);
-               
-               double numSingletons = rank->get(1);
-               double totalIndividuals = rank->getNumSeqs();
-               
-               data[0] = 1 - numSingletons/totalIndividuals;
-               
-               if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
-
-               return data;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "GoodsCoverage", "getValues");
-               exit(1);
-       }
-}
-
-/***********************************************************************/
-