changed how we break up the files on parallelized commands to avoid scanning file.

[mothur.git] / globaldata.hpp

diff --git a/globaldata.hpp b/globaldata.hpp
index 301527a3f9b1e07d7f82ecbd4a04778ec0f39c37..bfb8a0688e1fe6e811ef83dc08a803c2753fae46 100644 (file)
--- a/globaldata.hpp
+++ b/globaldata.hpp
@@ -61,6 +61,7 @@ public:
        string getOrderGroupFile();
        string getTreeFile();
        string getSharedFile();
+       string getRelAbundFile();
        string getFormat();     //do we need this?
 
 
@@ -73,6 +74,7 @@ public:
        void setRabundFile(string);
        void setSabundFile(string);
        void setSharedFile(string);
+       void setRelAbundFile(string);
        void setOrderFile(string file);
        void setOrderGroupFile(string file);
        void setFormat(string); //do we need this?
@@ -87,7 +89,7 @@ public:
        
 private:
        MothurOut* m;
-       string phylipfile, columnfile, listfile, rabundfile, sabundfile, namefile, groupfile, orderfile, treefile, sharedfile, format, distfile, ordergroup;
+       string phylipfile, columnfile, listfile, rabundfile, sabundfile, namefile, groupfile, orderfile, treefile, sharedfile, format, distfile, ordergroup, relAbundfile;
 
        static GlobalData* _uniqueInstance;
        GlobalData( const GlobalData& ); // Disable copy constructor