added formatmatrix, formatcolumn, and formatphylip classes. Used these classes in...

[mothur.git] / getsharedotucommand.cpp

diff --git a/getsharedotucommand.cpp b/getsharedotucommand.cpp
index 8081f1090f3754e9904bdc838a2133d0baf58f25..f224b479d610b179511ec3bd2b88ca2afe2b210a 100644 (file)
--- a/getsharedotucommand.cpp
+++ b/getsharedotucommand.cpp
@@ -357,7 +357,7 @@ void GetSharedOTUCommand::process(ListVector* shared) {
                                        }
                                        
                                        outFasta << seqs[k].getAligned() << endl;
-                               }
+                               }else {         mothurOut(seqs[k].getName() + " is not in your fasta file. Please correct."); mothurOutEndLine();       }
                        }
                        
                        outFasta.close();