added end of file character to some type type reads. fixes while testing.

[mothur.git] / getseqscommand.cpp

diff --git a/getseqscommand.cpp b/getseqscommand.cpp
index 480bde3222c9057aafecacc208d84eac24573b72..287f5a6acdc08a9c40b6e2e12b159a2f83fc9636 100644 (file)
--- a/getseqscommand.cpp
+++ b/getseqscommand.cpp
@@ -501,7 +501,7 @@ int GetSeqsCommand::readQual(){
                                saveName = name.substr(1);
                                while (!in.eof())       {       
                                        char c = in.get(); 
-                                       if (c == 10 || c == 13){        break;  }
+                                       if (c == 10 || c == 13 || c == -1){     break;  }
                                        else { name += c; }     
                                } 
                                m->gobble(in);