added flag to count table read so that commands that don't require the group info...

[mothur.git] / getseqscommand.cpp

diff --git a/getseqscommand.cpp b/getseqscommand.cpp
index 287f5a6acdc08a9c40b6e2e12b159a2f83fc9636..142023e7a40881c1c6397a761ba350132490b75c 100644 (file)
--- a/getseqscommand.cpp
+++ b/getseqscommand.cpp
@@ -587,7 +587,7 @@ int GetSeqsCommand::readCount(){
         //check for groups that have been eliminated
         CountTable ct;
         if (ct.testGroups(outputFileName)) {
-            ct.readTable(outputFileName);
+            ct.readTable(outputFileName, true);
             ct.printTable(outputFileName);
         }