working on pam

[mothur.git] / getsabundcommand.cpp

diff --git a/getsabundcommand.cpp b/getsabundcommand.cpp
index d3fb5298c5d1191c0f90b4787b6b2ed349de5f61..22abde5fade29a689fa88266772f5e3445d5158c 100644 (file)
--- a/getsabundcommand.cpp
+++ b/getsabundcommand.cpp
@@ -307,7 +307,7 @@ int GetSAbundCommand::execute(){
 int GetSAbundCommand::processList(ofstream& out){
        try {
         CountTable ct;
-        ct.readTable(countfile);
+        ct.readTable(countfile, false, false);
         
         InputData input(inputfile, format);
         ListVector* list = input.getListVector();