added headers to shared and relabund files

[mothur.git] / getrelabundcommand.cpp

diff --git a/getrelabundcommand.cpp b/getrelabundcommand.cpp
index 91384fab4e71bb37c865c1c037e829d2581e3a1a..d4caf5b59a758899606cfc316b20cb386679307c 100644 (file)
--- a/getrelabundcommand.cpp
+++ b/getrelabundcommand.cpp
@@ -175,6 +175,7 @@ int GetRelAbundCommand::execute(){
                        if(allLines == 1 || labels.count(lookup[0]->getLabel()) == 1){                  
 
                                m->mothurOut(lookup[0]->getLabel()); m->mothurOutEndLine();
+                               if (!m->printedHeaders) { lookup[0]->printHeaders(out); }
                                getRelAbundance(lookup, out);
                                
                                processedLabels.insert(lookup[0]->getLabel());
@@ -187,7 +188,7 @@ int GetRelAbundCommand::execute(){
                                for (int i = 0; i < lookup.size(); i++) {  delete lookup[i];  }  
                                lookup = input->getSharedRAbundVectors(lastLabel);
                                m->mothurOut(lookup[0]->getLabel()); m->mothurOutEndLine();
-                               
+                               if (!m->printedHeaders) { lookup[0]->printHeaders(out); }
                                getRelAbundance(lookup, out);
                                
                                processedLabels.insert(lookup[0]->getLabel());
@@ -228,7 +229,7 @@ int GetRelAbundCommand::execute(){
                        lookup = input->getSharedRAbundVectors(lastLabel);
                        
                        m->mothurOut(lookup[0]->getLabel()); m->mothurOutEndLine();
-                       
+                       if (!m->printedHeaders) { lookup[0]->printHeaders(out); }
                        getRelAbundance(lookup, out);
                        
                        for (int i = 0; i < lookup.size(); i++) {  delete lookup[i];  }