fixes while testing

[mothur.git] / getrelabundcommand.cpp

diff --git a/getrelabundcommand.cpp b/getrelabundcommand.cpp
index 5b9327b57bd928a5e456a7251a83be1a0664cd6c..8c28c47b220e1554972d3cdb97bd2218af4f1c77 100644 (file)
--- a/getrelabundcommand.cpp
+++ b/getrelabundcommand.cpp
@@ -24,6 +24,7 @@ vector<string> GetRelAbundCommand::getValidParameters(){
 //**********************************************************************************************************************
 GetRelAbundCommand::GetRelAbundCommand(){      
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["relabund"] = tempOutNames;