finished get.relabund command

[mothur.git] / getrelabundcommand.cpp

diff --git a/getrelabundcommand.cpp b/getrelabundcommand.cpp
index 8293c9b31485bad93f1bb8875f2e53fc28a1d746..4d155f2f0fda2b4462450ad5e2789e70a12b13d7 100644 (file)
--- a/getrelabundcommand.cpp
+++ b/getrelabundcommand.cpp
@@ -94,7 +94,7 @@ void GetRelAbundCommand::help(){
                m->mothurOut("The label parameter allows you to select what distance levels you would like, and are also separated by dashes.\n");
                m->mothurOut("The scale parameter allows you to select what scale you would like to use. Choices are totalgroup, totalotu, averagegroup, averageotu, default is totalgroup.\n");
                m->mothurOut("The get.relabund command should be in the following format: get.relabund(groups=yourGroups, label=yourLabels).\n");
-               m->mothurOut("Example get.relabund(groups=A-B-C, scale=log10).\n");
+               m->mothurOut("Example get.relabund(groups=A-B-C, scale=averagegroup).\n");
                m->mothurOut("The default value for groups is all the groups in your groupfile, and all labels in your inputfile will be used.\n");
                m->mothurOut("The get.relabund command outputs a .relabund file.\n");
                m->mothurOut("Note: No spaces between parameter labels (i.e. groups), '=' and parameters (i.e.yourGroups).\n\n");