working on pam

[mothur.git] / getrabundcommand.cpp

diff --git a/getrabundcommand.cpp b/getrabundcommand.cpp
index 4870a627663da88857f157e0cfd2912545a7aa61..469117ca7bdf4cfb65553bb45536c93fd06251d2 100644 (file)
--- a/getrabundcommand.cpp
+++ b/getrabundcommand.cpp
@@ -319,7 +319,7 @@ int GetRAbundCommand::execute(){
 int GetRAbundCommand::processList(ofstream& out){
        try {
         CountTable ct;
-        ct.readTable(countfile);
+        ct.readTable(countfile, false, false);
         
         InputData input(inputfile, format);
         ListVector* list = input.getListVector();