]> git.donarmstrong.com Git - mothur.git/blobdiff - getotuscommand.h
sffinfo bug with flow grams right index when clipQualRight=0
[mothur.git] / getotuscommand.h
index 4eff4b69569625561788804e16cf09379c4e97fb..c71ab062b431c9ca7945c8e0b8679980058939c8 100644 (file)
@@ -27,8 +27,9 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "get.otus";                            }
        string getCommandCategory()             { return "OTU-Based Approaches";        }
-       string getOutputFileNameTag(string, string);
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
        string getCitation() { return "http://www.mothur.org/wiki/Get.otus"; }
        string getDescription()         { return "outputs a new list file containing the otus containing sequences from the groups specified"; }