update .gitignore

[mothur.git] / getmimarkspackagecommand.h

diff --git a/getmimarkspackagecommand.h b/getmimarkspackagecommand.h
index ccef8326ac779ff1976d14bb62a4e8dd2a76d67b..65219d7758b0da0e1f795fb70f957bca5befad64 100644 (file)
--- a/getmimarkspackagecommand.h
+++ b/getmimarkspackagecommand.h
@@ -10,6 +10,7 @@
 #define Mothur_getmimarkspackagecommand_h
 
 #include "command.hpp"
+#include "oligos.h"
 
 /**************************************************************************************************/
 
@@ -33,11 +34,10 @@ public:
     
 private:
     bool abort, requiredonly;
-    string oligosfile, groupfile, package, inputfile, file;
+    string oligosfile, groupfile, package, inputfile, file, inputDir;
     string outputDir;
     vector<string> outputNames, Groups;
     
-    int readOligos();
     int readFile();
 };