- helpString += "The calc parameter allows to select the calculator you would like to use to calculate the distance matrix used by the pam method. By default the jsd calculator is used.\n";
- helpString += "The iters parameter allows you to choose the number of times you would like to run the subsample while calculating the distance matirx for the pam method.\n";
- helpString += "The subsample parameter allows you to enter the size pergroup of the sample or you can set subsample=T and mothur will use the size of your smallest group while calculating the distance matrix for the pam method.\n";
+ helpString += "The calc parameter allows to select the calculator you would like to use to calculate the distance matrix used by the pam and kmeans method. By default the rjsd calculator is used.\n";
+ helpString += "The iters parameter allows you to choose the number of times you would like to run the subsample while calculating the distance matrix for the pam and kmeans method.\n";
+ helpString += "The subsample parameter allows you to enter the size pergroup of the sample or you can set subsample=T and mothur will use the size of your smallest group while calculating the distance matrix for the pam and kmeans methods.\n";