adding labels to list file.

[mothur.git] / getlistcountcommand.cpp

diff --git a/getlistcountcommand.cpp b/getlistcountcommand.cpp
index a4d7b83397f83bf6ae3dd21627566252035b328f..2f194a8068555fb9f962e725bd9eec977d2fa174 100644 (file)
--- a/getlistcountcommand.cpp
+++ b/getlistcountcommand.cpp
@@ -260,19 +260,20 @@ void GetListCountCommand::process(ListVector* list) {
                m->mothurOut(list->getLabel()); m->mothurOutEndLine();
                
                //for each bin in the list vector
+        vector<string> binLabels = list->getLabels();
                for (int i = 0; i < list->getNumBins(); i++) {
                        if (m->control_pressed) { break; }
                        
                        binnames = list->get(i);
                        
                        if (sort == "otu") {
-                               out << i+1 << '\t' << binnames << endl;
+                               out << binLabels[i] << '\t' << binnames << endl;
                        }else{ //sort = name
                                vector<string> names;
                                m->splitAtComma(binnames, names);
                                
                                for (int j = 0; j < names.size(); j++) {
-                                       out << names[j] << '\t' << i+1 << endl;
+                                       out << names[j] << '\t' << binLabels[i] << endl;
                                }
                        }
                }