fixes while testing

[mothur.git] / getlistcountcommand.cpp

diff --git a/getlistcountcommand.cpp b/getlistcountcommand.cpp
index 31b174861c4c577659e478defcb7d0fa1d5e6c7a..1ecef653e11fe15d206b41fd958834be194455ff 100644 (file)
--- a/getlistcountcommand.cpp
+++ b/getlistcountcommand.cpp
@@ -24,6 +24,7 @@ vector<string> GetListCountCommand::getValidParameters(){
 //**********************************************************************************************************************
 GetListCountCommand::GetListCountCommand(){    
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["otu"] = tempOutNames;