fixes while testing

[mothur.git] / getlineagecommand.cpp

diff --git a/getlineagecommand.cpp b/getlineagecommand.cpp
index 91811fa4687202378585457d0087c2c5db973c52..eaa8d40f3d6b0ec28eb59f107ac16ba9aa0fc61e 100644 (file)
--- a/getlineagecommand.cpp
+++ b/getlineagecommand.cpp
@@ -27,6 +27,7 @@ vector<string> GetLineageCommand::getValidParameters(){
 //**********************************************************************************************************************
 GetLineageCommand::GetLineageCommand(){        
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["fasta"] = tempOutNames;