sped up the remove.seqs and remove.lineage and get.seqs and get.lineage. fixed bug...

[mothur.git] / getlineagecommand.cpp

diff --git a/getlineagecommand.cpp b/getlineagecommand.cpp
index 2a5505f149241c88b0591f1622a50d6a2fc89577..7950680c7e394ebbcf88f8108c4f7eb72029b3cd 100644 (file)
--- a/getlineagecommand.cpp
+++ b/getlineagecommand.cpp
@@ -442,15 +442,7 @@ int GetLineageCommand::readName(){
                        if (dups) { hold = secondCol; }
                        
                        vector<string> parsedNames;
-                       //parse second column saving each name
-                       while (secondCol.find_first_of(',') != -1) { 
-                               name = secondCol.substr(0,secondCol.find_first_of(','));
-                               secondCol = secondCol.substr(secondCol.find_first_of(',')+1, secondCol.length());
-                               parsedNames.push_back(name);
-                       }
-                       
-                       //get name after last ,
-                       parsedNames.push_back(secondCol);
+                       m->splitAtComma(secondCol, parsedNames);
                        
                        vector<string> validSecond;
                        for (int i = 0; i < parsedNames.size(); i++) {