added count file to trim.seqs, get.groups, get.lineage, get.seqs, heatmap.sim, list...

[mothur.git] / getgroupscommand.cpp

diff --git a/getgroupscommand.cpp b/getgroupscommand.cpp
index 7585c122eeb3a212fab404240f5b6f6568574634..910a8720bc3ec88079d2663ebf819408436ca02a 100644 (file)
--- a/getgroupscommand.cpp
+++ b/getgroupscommand.cpp
@@ -72,7 +72,7 @@ string GetGroupsCommand::getOutputFileNameTag(string type, string inputName=""){
             else if (type == "taxonomy")    {   outputFileName =  "pick" + m->getExtension(inputName);   }
             else if (type == "name")        {   outputFileName =  "pick" + m->getExtension(inputName);   }
             else if (type == "group")       {   outputFileName =  "pick" + m->getExtension(inputName);   }
-            else if (type == "count")       {   outputFileName =  "pick" + m->getExtension(inputName);   }
+            else if (type == "count")       {   outputFileName =  "pick.count.table";   }
             else if (type == "list")        {   outputFileName =  "pick" + m->getExtension(inputName);   }
             else if (type == "shared")      {   outputFileName =  "pick" + m->getExtension(inputName);   }
             else if (type == "design")      {   outputFileName =  "pick" + m->getExtension(inputName);   }