fixes while testing

[mothur.git] / getgroupcommand.cpp

diff --git a/getgroupcommand.cpp b/getgroupcommand.cpp
index 40bfb26c6a21cfd29368720ef91782e8cd638ac6..2847db149ac5e40defdbfdedfd9d99ae3df5d583 100644 (file)
--- a/getgroupcommand.cpp
+++ b/getgroupcommand.cpp
@@ -24,6 +24,7 @@ vector<string> GetgroupCommand::getValidParameters(){
 //**********************************************************************************************************************
 GetgroupCommand::GetgroupCommand(){    
        try {
+               abort = true;
                //initialize outputTypes
                vector<string> tempOutNames;
                outputTypes["bootgroup"] = tempOutNames;