sffinfo bug with flow grams right index when clipQualRight=0

[mothur.git] / geom.cpp

diff --git a/geom.cpp b/geom.cpp
index a52e64443a0ad1fa9a06ca77361eba8741ba97cb..5bd150ef7f8201254a392a52a7583b07b83e0b00 100644 (file)
--- a/geom.cpp
+++ b/geom.cpp
@@ -44,9 +44,9 @@ EstOutput Geom::getValues(SAbundVector* rank){
                data.resize(3,0);
                
                rdata = getRAbundVector(rank);
-               int numInd = rdata.getNumSeqs();
-               int numSpec = rdata.getNumBins();
-               int min = rdata.get(rdata.size()-1);
+               double numInd = rdata.getNumSeqs();
+               double numSpec = rdata.getNumBins();
+               double min = rdata.get(rdata.size()-1);
                double k = .5;
                double step = .49999;
                
@@ -86,7 +86,7 @@ EstOutput Geom::getValues(SAbundVector* rank){
                return data;
        }
        catch(exception& e) {
-               errorOut(e, "Geom", "getValues");
+               m->errorOut(e, "Geom", "getValues");
                exit(1);
        }
 }